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The comet assay in animal models: From bugs to whales – (Part 1 Invertebrates)
The comet assay, also called single cell gel electrophoresis, is a sensitive, rapid and low-cost technique for quantifying and analysing DNA damage and repair at the level of individual cells. The assay itself can be applied on virtually any cell type derived from different organs and tissues of eukaryotic organisms. Although it is mainly used on human cells, the assay has applications also in the evaluation of DNA damage in yeast, plant and animal cells. Therefore, the purpose of this review is to give an extensive overview on the usage of the comet assay in animal models from invertebrates to vertebrates, covering both terrestrial and water biota. The comet assay is used in a variety of invertebrate species since they are regarded as interesting subjects in ecotoxicological research due to their significance in ecosystems. Hence, the first part of the review (Part 1) will discuss the application of the comet assay in invertebrates covering protozoans, platyhelminthes, planarians, cnidarians, molluscs, annelids, arthropods and echinoderms. Besides a large number of animal species, the assay is also performed on a variety of cells, which includes haemolymph, gills, digestive gland, sperm and embryo cells. The mentioned cells have been used for the evaluation of a broad spectrum of genotoxic agents both in vitro and in vivo. Moreover, the use of invertebrate models and their role from an ecotoxicological point of view will also be discussed as well as the comparison of the use of the comet assay in invertebrate and human models. Since the comet assay is still developing, its increasing potential in assessing DNA damage in animal models is crucial especially in the field of ecotoxicology and biomonitoring at the level of different species, not only humans.
2019
2019
2019
2019
We present an Observing System Simulation Experiment (OSSE) dedicated to the evaluation of the added value of the Sentinel-4 and Sentinel-5P missions for tropospheric nitrogen dioxide (NO2). Sentinel-4 is a geostationary (GEO) mission covering the European continent, providing observations with high temporal resolution (hourly). Sentinel-5P is a low Earth orbit (LEO) mission providing daily observations with a global coverage. The OSSE experiment has been carefully designed, with separate models for the simulation of observations and for the assimilation experiments and with conservative estimates of the total observation uncertainties. In the experiment we simulate Sentinel-4 and Sentinel-5P tropospheric NO2 columns and surface ozone concentrations at 7 by 7 km resolution over Europe for two 3-month summer and winter periods. The synthetic observations are based on a nature run (NR) from a chemistry transport model (MOCAGE) and error estimates using instrument characteristics. We assimilate the simulated observations into a chemistry transport model (LOTOS-EUROS) independent of the NR to evaluate their impact on modelled NO2 tropospheric columns and surface concentrations. The results are compared to an operational system where only ground-based ozone observations are ingested. Both instruments have an added value to analysed NO2 columns and surface values, reflected in decreased biases and improved correlations. The Sentinel-4 NO2 observations with hourly temporal resolution benefit modelled NO2 analyses throughout the entire day where the daily Sentinel-5P NO2 observations have a slightly lower impact that lasts up to 3–6 h after overpass. The evaluated benefits may be even higher in reality as the applied error estimates were shown to be higher than actual errors in the now operational Sentinel-5P NO2 products. We show that an accurate representation of the NO2 profile is crucial for the benefit of the column observations on surface values. The results support the need for having a combination of GEO and LEO missions for NO2 analyses in view of the complementary benefits of hourly temporal resolution (GEO, Sentinel-4) and global coverage (LEO, Sentinel-5P).
2019
2019
2019
2019
Environmental Contaminants in an Urban Fjord, 2018
This programme, “Environmental Contaminants in an Urban Fjord” has covered sampling and analyses of sediment and organisms in a marine food web of the Inner Oslofjord, in addition to samples of blood and eggs from herring gull and eider duck. The programme also included inputs of pollutants via surface water (storm water), and effluent water and sludge from a sewage treatment plant. The bioaccumulation potential of the contaminants in the Oslo fjord food web was evaluated. The exposure to/accumulation of the contaminants was also assessed in birds. A vast number of chemical parameters have been quantified, in addition to some biological effect parameters in cod, and the report serves as valuable documentation of the concentrations of these chemicals in different compartments of the Inner Oslofjord marine ecosystem.
Norsk institutt for vannforskning (NIVA)
2019
This report presents VOC measurements carried out during 2017 at EMEP monitoring sites. In total, 20 sites reported VOC data from EMEP VOC sites this year. Some of the data sets are considered preliminary and are not included in the report. The monitoring of NMHC (non-methane hydrocarbons) has become more diverse with time in terms of instrumentation. Starting in the early 1990s with standardized methods based on manual sampling in steel canisters with subsequent analyses at the lab, the methods now consist of a variety of instruments and measurement principles, including automated continuous monitors and manual flask samples. For oxygenated VOCs (OVOCs), sampling in DNPH-tubes with subsequent labanalyses is still the only method in use at EMEP sites. Within the EU infrastructure project ACTRIS-2, data quality issues related to measurements of VOC have been an important topic. Many of the institutions providing VOC data to EMEP have participated in the ACTRIS-2 project, either as formal partners or on a voluntary basis. Participation in ACTRIS-2 has meant an extensive effort with data checking including detailed discussions between the ACTRIS community and individual participants. There is no doubt that this extensive effort has benefited the EMEP program and has led to improved data quality in general. Comparison between median levels in 2017 compared to the medians of the previous 10-years period, revealed a similar north-to-south pattern for several species. Changes in instrumentation, procedures, station network etc. during the last two decades make it difficult to provide a rigorous and pan-European assessment of long-term trends of the observed VOCs. In this report we have estimated the longterm trends in NMHC over the 2000-2017 period at six selected sites by two independent statistical methods. These estimates indicate marked differences in the trends for the individual species. Small or non-significant trends were found for ethane over this period followed by propane which also showed fairly small reductions. On the other hand, components linked to road traffic (ethene, ethyne and toluene) showed the strongest drop in mean concentrations, up to 60-80% at some stations. The trend in n-butane was between these two groups of species with an estimated drop in the annual mean concentration of 20-50% over the 2000-2017 period.
NILU
2019
Vinca Institute of Nuclear Sciences
2019