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2025
2025
A pooled analysis of host factors that affect nucleotide excision repair in humans
Nucleotide excision repair (NER) is crucial for repairing bulky lesions and crosslinks in DNA caused by exogenous and endogenous genotoxins. The number of studies that have considered DNA repair as a biomarker is limited, and therefore one of the primary objectives of the European COST Action hCOMET (CA15132) was to assemble and analyse a pooled database of studies with data on NER activity. The database comprised 738 individuals, gathered from 5 laboratories that ran population studies using the comet-based in vitro DNA repair assay. NER activity data in peripheral blood mononuclear cells were normalized and correlated with various host-related factors, including sex, age, body mass index (BMI), and smoking habits. This multifaceted analysis uncovered significantly higher NER activity in female participants compared to males (1.08 ± 0.74 vs. 0.92 ± 0.71; P = .002). Higher NER activity was seen in older subjects (>30 years), and the effect of age was most pronounced in the oldest females, particularly those over 70 years (P = .001). Females with a normal BMI (<25 kg/m2) exhibited the highest levels of NER, whereas the lowest NER was observed in overweight males (BMI ≥ 25 kg/m2). No independent effect of smoking was found. After stratification by sex and BMI, higher NER was observed in smoking males (P = .017). The biological implication of higher or lower repair capacity remains unclear; the inclusion of DNA repair as a biomarker in molecular epidemiological trials should elucidate the link between health and disease status.
2025
Atmospheric ammonia (NH3) is a key transboundary air pollutant that contributes to the impacts of nitrogen and acidity on terrestrial ecosystems. Ammonia also contributes to the atmospheric aerosol that affects air quality. Emission inventories indicate that NH3 was predominantly emitted by agriculture over the 19th and 20th centuries but, up to now, these estimates have not been compared to long-term observations. To document past atmospheric NH3 pollution in south-eastern Europe, ammonium (NH) was analysed along an ice core extracted from Mount Elbrus in the Caucasus, Russia. The NH ice-core record indicates a 3.5-fold increase in concentrations between 1750 and 1990 CE. Remaining moderate prior to 1950 CE, the increase then accelerated to reach a maximum in 1989 CE. Comparison between ice-core trends and estimated past emissions using state-of-the-art atmospheric transport modelling of submicron-scale aerosols (FLEXPART (FLEXible PARTicle dispersion) model) indicates good agreement with the course of estimated NH3 emissions from south-eastern Europe since ∼ 1750 CE, with the main contributions from south European Russia, Türkiye, Georgia, and Ukraine. Examination of ice deposited prior to 1850 CE, when agricultural activities remained limited, suggests an NH ice concentration related to natural soil emissions representing ∼ 20 % of the 1980–2009 CE NH level, a level mainly related to current agricultural emissions that almost completely outweigh biogenic emissions from natural soil. These findings on historical NH3 emission trends represent a significant contribution to the understanding of ammonia emissions in Europe over the last 250 years.
2025
Using a citizen science approach to assess nanoplastics pollution in remote high-altitude glaciers
Nanoplastics are suspected to pollute every environment on Earth, including very remote areas reached via atmospheric transport. We approached the challenge of measuring environmental nanoplastics by combining high-sensitivity TD-PTR-MS (thermal desorption-proton transfer reaction-mass spectrometry) with trained mountaineers sampling high-altitude glaciers (“citizen science”). Particles < 1 μm were analysed for common polymers (polyethylene, polyethylene terephthalate, polypropylene, polyvinyl chloride, polystyrene and tire wear particles), revealing nanoplastic concentrations ranging 2–80 ng mL− 1 at five of 14 sites. The dominant polymer types found in this study were tire wear, polystyrene and polyethylene particles (41%, 28% and 12%, respectively). Lagrangian dispersion modelling was used to reconstruct possible sources of micro- and nanoplastic emissions for those observations, which appear to lie largely to the west of the Alps. France, Spain and Switzerland have the highest contributions to the modelled emissions. The citizen science approach was found to be feasible providing strict quality control measures are in place, and is an effective way to be able to collect data from remote and inaccessible regions across the world.
2025
Permafrost is a considerable carbon reservoir harboring up to 1700 petagrams of carbon accumulated over millennia, which can be mobilized as permafrost thaws under global warming. Recent studies have highlighted that a fraction of this carbon can be transformed to atmospheric volatile organic compounds, which can affect the atmospheric oxidizing capacity and contribute to the formation of secondary organic aerosols. In this study, active layer soils from the seasonally unfrozen layer above the permafrost were collected from two distinct locations of the Greenlandic permafrost and incubated to explore their roles in the soil-atmosphere exchange of volatile organic compounds. Results show that these soils can actively function as sinks of these compounds, despite their different physiochemical properties. Upper active layer possessed relatively higher uptake capacities; factors including soil moisture, organic matter, and microbial biomass carbon were identified as the main factors correlating with the uptake rates. Additionally, uptake coefficients for several compounds were calculated for their potential use in future model development. Correlation analysis and the varying coefficients indicate that the sink was likely biotic. The development of a deeper active layer under climate change may enhance the sink capacity and reduce the net emissions of volatile organic compounds from permafrost thaw.
2025
2025
2025
VKM has assessed the positive and negative effects on biodiversity were sterile salmon to be used in Norwegian aquaculture. Triploidisation is assessed as the most effective method for sterilising fish, but it can affect the welfare and health of the fish.
Several other techniques for producing sterile salmon are being tested, but it is too early to determine whether they can be used in large-scale farming.
This is the key message in a knowledge summary VKM has prepared for the Norwegian Environment Agency.
Background
Escaped farmed salmon poses a major threat to wild salmon in Norway. hey can interbreed with wild salmon, genetically alter them, and make the populations less adaptable and more vulnerable to disease and environmental changes. A possible solution to the problem may be to use sterile salmon in farming.
To date, only triploidisation has been tested. Newly fertilised eggs are given a hydrostatic pressure shock, thereby retaining an extra set of chromosomes which render the fish sterile. This method is currently the only one tested on a large scale. Triploidisation is effective but can also pose health and welfare challenges to fish.
Methods
VKM has reviewed available scientific literature regarding methods that can be used to produce sterile salmon. VKM has assessed whether these methods work as well, or better, than triploidy and whether they are likely to have fewer negative effects on fish welfare. Assessments have also been made of whether farmed fish treated with other sterilisation methods pose a greater or lesser threat to wild salmon than traditional farmed salmon.
VKM has looked at the possibilities for further development of the triploidisation technique and has also assessed various methods currently being tested for producing sterile fish. Some of these are still at the laboratory-testing stage, while others are approaching trials with release into sea-pens. VKM has grouped the different methods based on whether they cause permanent changes in the genome (so-called "knock-out" of important genes) or whether the changes only result in temporary blocking or downregulation of gene expression (so-called "knock-down").
Results
VKM concludes that triploidisation remains the most effective method and that there are possibilities to further develop this methodology through targeted breeding and adjustments in how the fish are kept. These measures can potentially solve the challenges for fish health and welfare. Using pure triploid female lines can also reduce some of the other challenges by preventing spawning interactions in rivers and reducing disease transmission to wild salmon.
Alternative sterilisation methods, such as gene editing, vaccination, and temporary downregulation of proteins for gonad development using antisense oligomers and egg immersion, are promising but still under development.
VKM assesses that methods causing permanent changes in the genome of diploid fish have a higher inherent risk than methods that only affect gene expression.
Hope in egg-bathing
Perhaps the most promising technique for safe production of sterile salmon is to add synthetic oligonucleotides to the eggs at an early stage, thereby preventing germ cell development without causing any inheritable changes. Such oligonucleotides can be injected into the eggs or absorbed by the eggs through bathing (immersion) in a special solution.
"Especially the method involving targeted 'tools,' such as oligonucleotides that prevent germ cell development and can be added to the eggs in a water bath, seems promising," says Johanna Bodin, member of the Panel for Genetically Modified organisms and spokesperson for the report.
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2025
Carbonaceous aerosols (CA), composed of black carbon (BC) and organic matter (OM), significantly impact the climate. Light absorption properties of CA, particularly of BC and brown carbon (BrC), are crucial due to their contribution to global and regional warming. We present the absorption properties of BC (bAbs,BC) and BrC (bAbs,BrC) inferred using Aethalometer data from 44 European sites covering different environments (traffic (TR), urban (UB), suburban (SUB), regional background (RB) and mountain (M)). Absorption coefficients showed a clear relationship with station setting decreasing as follows: TR > UB > SUB > RB > M, with exceptions. The contribution of bAbs,BrC to total absorption (bAbs), i.e. %AbsBrC, was lower at traffic sites (11–20 %), exceeding 30 % at some SUB and RB sites. Low AAE values were observed at TR sites, due to the dominance of internal combustion emissions, and at some remote RB/M sites, likely due to the lack of proximity to BrC sources, insufficient secondary processes generating BrC or the effect of photobleaching during transport. Higher bAbs and AAE were observed in Central/Eastern Europe compared to Western/Northern Europe, due to higher coal and biomass burning emissions in the east. Seasonal analysis showed increased bAbs, bAbs,BC, bAbs,BrC in winter, with stronger %AbsBrC, leading to higher AAE. Diel cycles of bAbs,BC peaked during morning and evening rush hours, whereas bAbs,BrC, %AbsBrC, AAE, and AAEBrC peaked at night when emissions from household activities accumulated. Decade-long trends analyses demonstrated a decrease in bAbs, due to reduction of BC emissions, while bAbs,BrC and AAE increased, suggesting a shift in CA composition, with a relative increase in BrC over BC. This study provides a unique dataset to assess the BrC effects on climate and confirms that BrC can contribute significantly to UV–VIS radiation presenting highly variable absorption properties in Europe.
2025